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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928787.1_cds_XP_016476289.1_68133
CDS Infomation

[gene=LOC107797883] [db_xref=GeneID:107797883] [protein=mitochondrial-processing peptidase subunit alpha-like] [protein_id=XP_016476289.1] [location=complement(join(19416..19468,19552..19664,21305..21354,21468..21538,21704..21776,23173..23270,23593..23659,31007..31087,31175..31342,31449..31616,31694..31990,32080..32316,33622..33660))] [gbkey=CDS]
Sequence

ATGTACAGAACCGCATCTTCTCGCCTCCGAGCACTTAAGGTTCGCGGAGGCAGTAGGGCC
TTCGCAAGATTTTCAAGTTCAACTGCTGTTGTGACCAAGCCATCTGGGGGCCTCTTTAGT
TGGATAACTGGTGGCAGGTCAGATTCATTACCCTCTCTGGACTTCCCCCTCAAGGATGTT
CAGCTTCCTCCACCATTACCTGATTATATTGAACCTGGAAAGACCAAGATAACAACTCTC
ACAAATGGTCTCAAAATAGCCTCAGAAACATCATCAAGCCCTGCCGCCTCAATTGGCTTA
TATGTTGATTGTGGTTCCATTTACGAAACACCGGTTTCATATGGAGCCACACACCTCTTG
GAACGCATGGCCTTCAAAAGCACATTAAACCGGAGCCACCTACGTATTGTACGAGAAGTT
GAAGCAATTGGCGGTAATGTAGCTGCTGCTGCCTCACGAGAGCATATGATATACACTTAC
GATGCTTTGAAAACATATGTTCCTCAGATGGTGGAACTGCTTGTTGATTGTGTTAGAAAT
CCAGCATTTTTGGATTGGGAAGTTAACGAACAGCTTGAGAAGGTTAAAGCTGAGATTGAT
GAATACTCTAAAAACCCGCAACACTTGCTTTTGGAGGCAGTTCACTCTGCTGGTTATTCT
GGTTCATACGGGAATTCTCTAGCAGCCACAGAAGCCACAGTGAACAGGTTGAACAGCACT
GTACTGGAGGAGTTTGTAGCTGAGAATTATACTGCTCCTCGGATTGTTCTTGCTGCATCA
GGTGTTGAACATGAAGAATTGTTAAAAGTTGCAGAGCCTCTTTTATCCGACTTACCTAAG
GTGCCCCGTGCGGAGGAGCCGACACCTGTGTATGTAGGAGGTGATTACCGCCGTCAAGCT
GATTCAGGGATGACACATTTTGCACTAGCTTTTGAAGTTTCTGGTGGCTGGCTTAAAGAA
AAGGATGCTATGACTTTAACTGTTCTTCAGATGCTTATGGGAGGAGGTGGATCTTTCTCA
GCTGGCGGTCCCGGAAAAGGGATGTATTCTAGACTATATCTCCGTGTCTTGAATGCGTAT
CCACAGATCCATGCCTTTTCCGCATTCAGCAGCATTTATAATAACACTGGACTATTTGGA
ATTCAAGCAGCCACAACCTCTGATTTTGCACCAAGAGCTATTGAAGTAGCGATTAAAGAG
CTTACTGCAGTTGCAAACCCAAAAGAAGTTGACCAGGTACAGCTAGACCGTGCAAAACAG
TCAACAAAGTCTGCAATTCTAATGAACCTGGAGTCACGTATGGTTGCATCAGAAGATATT
GGGAGACAACTTTTGACTTATGGAGAGAGGAATCCAGTGGAGCATTTCTTGAAAGCCATT
GACACAATTACAGCCAATGATGTTGCTTCTATGGCAGAGAAGCTTATTTCTTCTCCTCTG
ACAATGGCATCCTATGGAGATGTTCTTTCCCTCCCCACATACGACGCAGTTAGCAGCAGG
TTCCATTCCAAATAA

Peptide Sequence

PEP ID

XP_016476289.1
PEP Infomation

PREDICTED: mitochondrial-processing peptidase subunit alpha-like [Nicotiana tabacum]
Sequence

MYRTASSRLRALKVRGGSRAFARFSSSTAVVTKPSGGLFSWITGGRSDSLPSLDFPLKDV
QLPPPLPDYIEPGKTKITTLTNGLKIASETSSSPAASIGLYVDCGSIYETPVSYGATHLL
ERMAFKSTLNRSHLRIVREVEAIGGNVAAAASREHMIYTYDALKTYVPQMVELLVDCVRN
PAFLDWEVNEQLEKVKAEIDEYSKNPQHLLLEAVHSAGYSGSYGNSLAATEATVNRLNST
VLEEFVAENYTAPRIVLAASGVEHEELLKVAEPLLSDLPKVPRAEEPTPVYVGGDYRRQA
DSGMTHFALAFEVSGGWLKEKDAMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYLRVLNAY
PQIHAFSAFSSIYNNTGLFGIQAATTSDFAPRAIEVAIKELTAVANPKEVDQVQLDRAKQ
STKSAILMNLESRMVASEDIGRQLLTYGERNPVEHFLKAIDTITANDVASMAEKLISSPL
TMASYGDVLSLPTYDAVSSRFHSK

Transcript Sequence

Gene sequence data has not been registered.